MEGAResFrom MEG, the Microbial Ecology Group

OMPF

The omp genes encode outer membrane proteins that have been implicated with multi-drug resistance due to narrowing of the lumen or reduced permeability to antibiotics.

References

Other Groups in MDR mutant porin proteins

Sequences

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>Mdr|CP000647.1|gene956|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation
ATGATGAAGCGCAATATTCTGGCAGTGGTGATCCCTGCCCTGCTGGTAGCCGGTGCAGCCAACGCTGCAGAAATCTATAA
CAAAAACGGCAACAAACTGGACTTCTATGGAAAAATGGTCGGCGAGCACGTCTGGACCACCAATGGCGACACCAGCAGCG
ACGATACCACCTATGCCCGTATCGGCCTGAAAGGCGAAACTCAGATCAACGATCAGCTGATCGGCTACGGCCAGTGGGAA
TACAACATGGACGCGTCCAATGTTGAAGGTTCCCAGACCACAAAAACCCGTCTGGCGTTCGCGGGCCTGAAAGCGGGCGA
ATACGGTTCATTCGACTATGGCCGTAACTACGGCGCGATCTACGACGTCGAAGCGGCAACCGATATGCTGGTTGAATGGG
GCGGTGACGGCTGGAACTATACCGACAACTACATGACCGGTCGTACCAACGGCGTCGCAACCTACCGTAACTCCGACTTC
TTCGGTCTGGTTGACGGTCTGAGCTTCGCGCTGCAGTACCAGGGTAAAAACGACCATGACCGTGCGATTCGCAAGCAGAA
TGGCGACGGCTTCAGCACCGCAGCCACCTACGCGTTCGACAACGGTATCGCACTGTCTGCAGGCTACTCCAGCTCTAACC
GTAGCGTCGATCAGAAAGCTGACGGCAATGGCGACAAAGCCGAAGCCTGGGCGACCTCTGCAAAATATGACGCTAACAAC
ATCTATGCGGCCGTCATGTACTCCCAGACTTACAACATGACTCCGGAAGAAGATAACCACTTCGCCGGTAAAACTCAGAA
CTTTGAAGCAGTTGTACAGTATCAGTTTGACTTCGGCCTGCGTCCGTCCATCGGCTACGTACAGACCAAAGGGCAAGGAC
CTGCAGTCGCGTGCTGGCTTCTCCGGCGGCGATGCGGATCTGGTTAA

>Flq|FN543093.2|gene1593|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation
ATGAAGCGCAATATCCTGGCAGTGGTTATCCCTGCCCTGCTGGTAGCCGGTGCAGCAAACGCTGCAGAAATCTATAACAA
AAACGGCAACAAACTGGATCTTTACGGCAAAGTTACTGCTGAACACGATTTCGTGACATCAGGCGACAACACCAGCAATG
GTGATGCGACTTACGCTCAGCTGGGCTTCAAAGGCGAAACTCAGATTAACGATCAGCTGACCGGTTATGGTCAGTGGGAA
TACCGTGCGTATGCGACCAGCGCTGAATCTGAGCAGGGCGCTAACAACTCTAACCGTACCCGTCTGGCCTTTGCTGGTCT
GAAAATTGCGGACGCGGGCTCCATCGATTACGGCCGTAATTACGGTATCGTATACGATGTTGAATCCTACACCGATATGG
CACCGTCTTACTCCGGTATGACCTGGGCTAACTATTCTGATAACTTCATGACCGGCCGTACCACTGGTGTTCTGACTTAC
CGTAACACCGGCTTCTTCGGCCTGGCTGACGGTCTGAACTTTGGTATCCAGTATCAGGGTAAAAACGACCGTGATAACGT
TGCTACTTCTAACGGCGATGGCGTTGGTTACTCACTGGGTTACGATTTTGGCGAAGGCTTCAGCCTGATTGGTGCGTACA
GCAACTCTAACCGTACTCTTCAGCAGAAACTGGATGATAAAGGCGATCGCGCTGAAGCATGGGCAGTTGGTGCCAAGTAC
GATGCTAACAACCTGTACCTGGCGACCGTGTATGCTGAGACTCGCAACATGACTCGCGAAGCTGATAACACCTTTGCGAA
CAAAACTCAGAACTTTGAAGCGATCGCTCAGTACCAGTTCGATTTCGGTCTGCGTCCGTCCCTGTCTTACGTACAGTCTA
AAGGTAAAAACCTGACTGCTCGTGGCACCTTCGATGGCGGCGATGCTGACCTGCAGAAATATGTTGAAGTTGGTGCTTAC
TACTACTTCAACAAAAACTTCAACGTATACGTTGACTACCAGATCAACCTGATCGATAACGACGCTTACGCTCGTAACGT
GGGTATCGTTAACGGTCGTGACGACCAGGTTGCACTGGCTGCGACCTACCAGTTCTAA

>Bla|NC_003197.1.1252517|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation
ATGATGAAGCGCAAAATCCTGGCAGCGGTGATCCCTGCCCTGCTGGCTGCTGCAACCGCAAACGCAGCAGAAATTTATAA
TAAAGATGGTAATAAGCTGGATCTGTACGGTAAAGCCGTGGGTCGTCACGTATGGACAACGACCGGCGATAGTAAAAATG
CCGACCAGACTTATGCCCAGATTGGTTTTAAAGGGGAAACGCAGATTAACACCGATCTGACCGGTTTCGGTCAGTGGGAA
TACCGTACTAAAGCAGACCGCGCTGAAGGCGAACAGCAGAACTCGAATCTGGTCCGTCTGGCTTTCGCGGGTTTGAAATA
CGCGGAAGTGGGTTCAATCGATTATGGTCGTAACTACGGTATCGTTTATGATGTTGAATCCTATACCGATATGGCCCCCT
ACTTCTCCGGCGAAACCTGGGGCGGCGCCTATACTGATAACTACATGACCAGCCGTGCTGGCGGTTTGTTGACCTACCGT
AACTCTGACTTCTTTGGTCTGGTGGACGGTCTCTCTTTCGGTATCCAGTATCAGGGTAAAAATCAGGACAACCACAGCAT
TAACTCTCAGAATGGCGATGGCGTAGGTTACACCATGGCATATGAGTTCGACGGCTTTGGCGTCACCGCAGCGTACAGCA
ACAGCAAGCGTACTAACGATCAGCAGGATCGCGATGGTAATGGCGATCGCGCAGAATCGTGGGCCGTTGGCGCGAAATAT
GATGCAAACAACGTCTACCTGGCTGCCGTATATGCTGAAACCCGCAATATGAGCATTGTTGAAAATACGGTTACCGATAC
CGTGGAAATGGCAAACAAAACGCAGAACCTGGAAGTGGTCGCTCAGTACCAGTTTGACTTCGGCCTGCGTCCGGCAATCT
CGTATGTGCAGAGTAAAGGTAAGCAGTTGAACGGCGCCGGCGGCTCGGCCGATCTGGCGAAATATATTCAGGCGGGCGCG
ACTTACTACTTCAACAAAAACATGAACGTATGGGTTGACTACCGTTTCAACCTGCTGGACGAAAACGACTACAGCTCCAG
CTACGTTGGCACCGACGATCAGGCGGCTGTCGGTATTACTTACCAGTTCTGA

>CARD|pvgb|NC_007779|986315-987404|ARO:3003390|Escherichia|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation
TTAGAACTGGTAAACGATACCCACAGCAACGGTGTCGTCTGAACCTACGCCCAGTTTGTTGTCAGAATCGATCTGGTTGA
TGATGTAGTCAACATAGGTGGACATGTTTTTGTTGAAGTAGTAGGTTGCGCCCACTTCAAAGTAGTTCACCAGATCAACA
TCACCGATACCTTCTACGTCTTTCGCTTTAGATTTGGTGTAAGCGATGGACGGACGCAGACCGAAATCGAACTGGTATTG
CGCAACTAACAGAACGTCTTGCGTTTTGTTGGCGAAGCCGCTGGTGTTTGTAAATTTATTAGTGATCGGCGTAGCGTTAC
GGGTTTCACCGTAGTTCGCTGCCAGGTAGATGTTGTTCGCGTCGTACTTCAGACCAGTAGCCCACTGTTCAGCTTTTTTA
CCGTTGCCAAGAGGTTGAGCTTCTTGCAGGTTGGTACGGTCAGCTGCACCATAAGCACCAACGATACCAAAGCCTTCGTA
TTCGTAGCTGATAGAACCGCCAACACCGTCGCCGTTAGAACGGCGTGCAGTGTCACGCTCGTTTTTACCCAGGTACTGAA
CAGCGAAGTTCAGGCCATCAACCAGACCAAAGAAGTTGGAGTTACGATAGGTAGCAACGCCGCCAACACGACCAACGAAG
AAGTCATCGCTGTATGCAGTATCACCACCAAATTCTGGCAGCATATCGGTGTAACCCAGTGCATCATAAACCACACCGTA
GTTACGGCCGTAATCGAAAGAACCAACGTCAGCGTATTTAAGACCCGCGAATGCCAGACGCGTTTTGTTACCAGTTTGAG
CGTCAGCGCCTTCAGAGTTGTTACCCTGGAAGTTATATTCCCACTGACCATAACCGGTCAGATCGGAATTGATTTGAGTT
TCCCCTTTAAAACCAAGACGGGCATAGGTCATGTCGCCATTGCCACCGTAACTGTTTTCACCGTTACCCTTGGAAAAATA
ATGCAGACCAACAGCTTTACCGTACAGATCTACTTTGTTGCCATCTTTGTTATAGATTTCTGCAGCGTTTGCAGTACCTG
CTACTAACAGAGCAGGGACGATCACTGCCAGAATATTGCGCTTCATCATT