MEGAResFrom MEG, the Microbial Ecology Group

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OMPF

The omp genes encode outer membrane proteins that have been implicated with multi-drug resistance due to narrowing of the lumen or reduced permeability to antibiotics.

References

  • http://www.ncbi.nlm.nih.gov/pubmed/18358664

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Other Groups in MDR mutant porin proteins

Sequences

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>>MEG_4286|Drugs|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation
ATGATGAAGCGCAATATTCTGGCAGTGGTGATCCCTGCCCTGCTGGTAGCCGGTGCAGCCAACGCTGCAGAAATCTATAA
CAAAAACGGCAACAAACTGGACTTCTATGGAAAAATGGTCGGCGAGCACGTCTGGACCACCAATGGCGACACCAGCAGCG
ACGATACCACCTATGCCCGTATCGGCCTGAAAGGCGAAACTCAGATCAACGATCAGCTGATCGGCTACGGCCAGTGGGAA
TACAACATGGACGCGTCCAATGTTGAAGGTTCCCAGACCACAAAAACCCGTCTGGCGTTCGCGGGCCTGAAAGCGGGCGA
ATACGGTTCATTCGACTATGGCCGTAACTACGGCGCGATCTACGACGTCGAAGCGGCAACCGATATGCTGGTTGAATGGG
GCGGTGACGGCTGGAACTATACCGACAACTACATGACCGGTCGTACCAACGGCGTCGCAACCTACCGTAACTCCGACTTC
TTCGGTCTGGTTGACGGTCTGAGCTTCGCGCTGCAGTACCAGGGTAAAAACGACCATGACCGTGCGATTCGCAAGCAGAA
TGGCGACGGCTTCAGCACCGCAGCCACCTACGCGTTCGACAACGGTATCGCACTGTCTGCAGGCTACTCCAGCTCTAACC
GTAGCGTCGATCAGAAAGCTGACGGCAATGGCGACAAAGCCGAAGCCTGGGCGACCTCTGCAAAATATGACGCTAACAAC
ATCTATGCGGCCGTCATGTACTCCCAGACTTACAACATGACTCCGGAAGAAGATAACCACTTCGCCGGTAAAACTCAGAA
CTTTGAAGCAGTTGTACAGTATCAGTTTGACTTCGGCCTGCGTCCGTCCATCGGCTACGTACAGACCAAAGGGCAAGGAC
CTGCAGTCGCGTGCTGGCTTCTCCGGCGGCGATGCGGATCTGGTTAA

>>MEG_4287|Drugs|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation
ATGAAGCGCAATATCCTGGCAGTGGTTATCCCTGCCCTGCTGGTAGCCGGTGCAGCAAACGCTGCAGAAATCTATAACAA
AAACGGCAACAAACTGGATCTTTACGGCAAAGTTACTGCTGAACACGATTTCGTGACATCAGGCGACAACACCAGCAATG
GTGATGCGACTTACGCTCAGCTGGGCTTCAAAGGCGAAACTCAGATTAACGATCAGCTGACCGGTTATGGTCAGTGGGAA
TACCGTGCGTATGCGACCAGCGCTGAATCTGAGCAGGGCGCTAACAACTCTAACCGTACCCGTCTGGCCTTTGCTGGTCT
GAAAATTGCGGACGCGGGCTCCATCGATTACGGCCGTAATTACGGTATCGTATACGATGTTGAATCCTACACCGATATGG
CACCGTCTTACTCCGGTATGACCTGGGCTAACTATTCTGATAACTTCATGACCGGCCGTACCACTGGTGTTCTGACTTAC
CGTAACACCGGCTTCTTCGGCCTGGCTGACGGTCTGAACTTTGGTATCCAGTATCAGGGTAAAAACGACCGTGATAACGT
TGCTACTTCTAACGGCGATGGCGTTGGTTACTCACTGGGTTACGATTTTGGCGAAGGCTTCAGCCTGATTGGTGCGTACA
GCAACTCTAACCGTACTCTTCAGCAGAAACTGGATGATAAAGGCGATCGCGCTGAAGCATGGGCAGTTGGTGCCAAGTAC
GATGCTAACAACCTGTACCTGGCGACCGTGTATGCTGAGACTCGCAACATGACTCGCGAAGCTGATAACACCTTTGCGAA
CAAAACTCAGAACTTTGAAGCGATCGCTCAGTACCAGTTCGATTTCGGTCTGCGTCCGTCCCTGTCTTACGTACAGTCTA
AAGGTAAAAACCTGACTGCTCGTGGCACCTTCGATGGCGGCGATGCTGACCTGCAGAAATATGTTGAAGTTGGTGCTTAC
TACTACTTCAACAAAAACTTCAACGTATACGTTGACTACCAGATCAACCTGATCGATAACGACGCTTACGCTCGTAACGT
GGGTATCGTTAACGGTCGTGACGACCAGGTTGCACTGGCTGCGACCTACCAGTTCTAA

>>MEG_4288|Drugs|Multi-drug_resistance|MDR_mutant_porin_proteins|OMPF|RequiresSNPConfirmation
ATGATGAAGCGCAAAATCCTGGCAGCGGTGATCCCTGCCCTGCTGGCTGCTGCAACCGCAAACGCAGCAGAAATTTATAA
TAAAGATGGTAATAAGCTGGATCTGTACGGTAAAGCCGTGGGTCGTCACGTATGGACAACGACCGGCGATAGTAAAAATG
CCGACCAGACTTATGCCCAGATTGGTTTTAAAGGGGAAACGCAGATTAACACCGATCTGACCGGTTTCGGTCAGTGGGAA
TACCGTACTAAAGCAGACCGCGCTGAAGGCGAACAGCAGAACTCGAATCTGGTCCGTCTGGCTTTCGCGGGTTTGAAATA
CGCGGAAGTGGGTTCAATCGATTATGGTCGTAACTACGGTATCGTTTATGATGTTGAATCCTATACCGATATGGCCCCCT
ACTTCTCCGGCGAAACCTGGGGCGGCGCCTATACTGATAACTACATGACCAGCCGTGCTGGCGGTTTGTTGACCTACCGT
AACTCTGACTTCTTTGGTCTGGTGGACGGTCTCTCTTTCGGTATCCAGTATCAGGGTAAAAATCAGGACAACCACAGCAT
TAACTCTCAGAATGGCGATGGCGTAGGTTACACCATGGCATATGAGTTCGACGGCTTTGGCGTCACCGCAGCGTACAGCA
ACAGCAAGCGTACTAACGATCAGCAGGATCGCGATGGTAATGGCGATCGCGCAGAATCGTGGGCCGTTGGCGCGAAATAT
GATGCAAACAACGTCTACCTGGCTGCCGTATATGCTGAAACCCGCAATATGAGCATTGTTGAAAATACGGTTACCGATAC
CGTGGAAATGGCAAACAAAACGCAGAACCTGGAAGTGGTCGCTCAGTACCAGTTTGACTTCGGCCTGCGTCCGGCAATCT
CGTATGTGCAGAGTAAAGGTAAGCAGTTGAACGGCGCCGGCGGCTCGGCCGATCTGGCGAAATATATTCAGGCGGGCGCG
ACTTACTACTTCAACAAAAACATGAACGTATGGGTTGACTACCGTTTCAACCTGCTGGACGAAAACGACTACAGCTCCAG
CTACGTTGGCACCGACGATCAGGCGGCTGTCGGTATTACTTACCAGTTCTGA